CDS

Accession Number TCMCG051C00116
gbkey CDS
Protein Id XP_024449774.1
Location join(569405..569725,570049..570174,570286..570325,570410..570492,571180..571257,571403..571456,571674..571808,571963..573432)
Gene LOC7483260
GeneID 7483260
Organism Populus trichocarpa

Protein

Length 768aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024594006.1
Definition splicing factor 1 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category A
Description K homology RNA-binding domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13095        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGAGTGTGAAGAAGGTAGACCAGACATCTGCAGTTGAGCTTCAAAGTATTAAGATGACTGCAACAAGCTCTTCATCCGGTGCATCGACAACTAGTGGTCCAAAGGTGTCTTTATTTGCAGCTAAGTCAGGGTTTGTTATCCCTAAAAATAAACTTTTGGGTTCATTAGTTTCCATCGTCAAAGGAGGTAAAAAGCCGGGTAGTAAAAATGCAGTGAATGGAGAAAGTACCAATCAGGAACAGGTTCAGAGGAAAACCAAATGGGGTCCTGATTTAACACAAGATGCTTCTGTTAAAAGGGGAAGAGCCTTGGCATACCAGATTAGAGTGGATCAAATTGTGCAACAACTGGAATTGGGAATTCCAGAACCTGGGAGGGATGGAGACTCACATGACTCCAATGAGCTTGAAGATCCCAAATCTTCGATTCCACAAATCCATACTAAGAACTCTGAGATCTTGGAACTTGAAAAACAGGAAGCTATAGGTGAGATACTTATATTGAATCCAAGCTACAAGGCTCCACCCAATTATAAGCCTTTGCTAAAAGAGACCACAGTTCCCATCCCTGTCAAGGAGTATCCTGGATATAATTTTATTGGTCTAATATTTGGGCTTGGAAGCGAGACTCAGAAGCGATTAGAAAAGGAAACTGGAGCCAAAATACAAGTACATGGTTCCAACGTGCATACAGGAGAGAAGGTTGAGATTTCTCCATCTGATGGCAATGAGACTAAGGTTGCTTATGAGGAGTTGAGTGTTCATGTAACAGCCGACACATTTGAGAAAGTTGACGCAGCTGTTGTCCTGATTGAATTGCTAATCACCTCAGTATCAGGAAATTTAGCGGCTGGGGATAATGCAAATGTTAGTCAGAATCAGGCGGCCTCTACTGCTTTTATGGTCTCTACTGCTGTAAACCAAGGAGTGGTGCTATCTTTTACTCCTCAACAAGGCCAGTTCCAATATCAAAATTCATGGCTCCCTGCTGCCACACCTCTACATCCACCTCCGGGCTTAATTTTCCCTCAGACTTCTTCAGCACCAGTTTTAAACAATCCTATACCTTTACAGTCAGCATCTTTCAATTCTTCAACCATGCCTTCATTATTCGGGCCTAGACTGGCACAGGCCTTTTCAAATCCATATCAGCCTAGAAATTTTCCCATGCCTACTCCACAGCCTCAATCTTTTACTGGTAGCCAGCCCCACCCAACAGGGCTGTACTCTGTTGCAAGGCCACCATTACTTCAACCCTCGTCAAGTGGTTCACATGATGGGCTTTTAGTCCCTTCTGGGTGGTCTGGATCTCCTGCAAGTGTTCCGGCATCATTAGGTTTTGTCAACATGGGACAAACAACAACTCCTATAGTTCCCTCACCTGGTCCATGGCCTACTGTTCCACAGCTAGGTTTTCCATCCAATGCACCACCTCCAAATGCAGCTAATATGGTTTCTCCTGTAACCTTCCCACCGGGACCATCCTCTCTGCAATCACACAGTGTTTCTATGAATCATCCTACCCTAATCCAATCTTCACTGGTTGCTCCTTTGCCAATTTCATCCATAAACCCGGTACTTGGTTCCACGCCAATTTCAGGAGTTGTAGGAGCTTTTTCTGGAACTACCTCAAATTTTGCTTCCATGAGATCACCCACAATAACAGATGCAAAAATACAGCACTCTGGTCCTGGTGATTTTACTTTTCAACCACATCATCTGCAGAATCCAGCTCCCCAAATAGCTCCCAGGCTTAGCAGTCATCATGCTGCTCAAAACGGTCCACTTCCTAGACCCATGATGCAATCGCCAGCACCTCAAGGACCACCTTTCCACTTCGAGGTCCCTAATTCAACTCCTCTACCTGGCAGGCAGATGTTTCCTAGACCACAGGTCAGCAACCAAATGGGTCAAGTCCCCTTTGTTGGAAATCCTACTGGTCCCTCGCTTCCCCCCAGCCTTCCAGCATTTTCAAATGCAAATTCATTTGGACAACCAGTCATGCAGATGGTGTCGAGGAACTTAAGTTCAACTCCCCACATACCCTATTTAACAGGTCCTTTACCTCCCAGACCGGGAAACCCCTTGCAACTTCAGCAGAATTATCCAGTTCCAATAGCTCCTCGAGGACAATCATTTGCTCCGAATCAGCAGCCTTTCATCTCCTTGGCATCTGCTAGACCAGCTTCATTCCACGGAGGTCAGCATGTTTATGATCCATTTTCACCTACTTCTGTGTCAACTGCGTCTCAACGGCAAGGAGCTAATCTAGGAGAGGGAAGAAAGCCAGAGAATGATCCACTGTAA
Protein:  
MSVKKVDQTSAVELQSIKMTATSSSSGASTTSGPKVSLFAAKSGFVIPKNKLLGSLVSIVKGGKKPGSKNAVNGESTNQEQVQRKTKWGPDLTQDASVKRGRALAYQIRVDQIVQQLELGIPEPGRDGDSHDSNELEDPKSSIPQIHTKNSEILELEKQEAIGEILILNPSYKAPPNYKPLLKETTVPIPVKEYPGYNFIGLIFGLGSETQKRLEKETGAKIQVHGSNVHTGEKVEISPSDGNETKVAYEELSVHVTADTFEKVDAAVVLIELLITSVSGNLAAGDNANVSQNQAASTAFMVSTAVNQGVVLSFTPQQGQFQYQNSWLPAATPLHPPPGLIFPQTSSAPVLNNPIPLQSASFNSSTMPSLFGPRLAQAFSNPYQPRNFPMPTPQPQSFTGSQPHPTGLYSVARPPLLQPSSSGSHDGLLVPSGWSGSPASVPASLGFVNMGQTTTPIVPSPGPWPTVPQLGFPSNAPPPNAANMVSPVTFPPGPSSLQSHSVSMNHPTLIQSSLVAPLPISSINPVLGSTPISGVVGAFSGTTSNFASMRSPTITDAKIQHSGPGDFTFQPHHLQNPAPQIAPRLSSHHAAQNGPLPRPMMQSPAPQGPPFHFEVPNSTPLPGRQMFPRPQVSNQMGQVPFVGNPTGPSLPPSLPAFSNANSFGQPVMQMVSRNLSSTPHIPYLTGPLPPRPGNPLQLQQNYPVPIAPRGQSFAPNQQPFISLASARPASFHGGQHVYDPFSPTSVSTASQRQGANLGEGRKPENDPL